Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891636.1_cds_XP_016446483.1_41332
CDS Infomation

[gene=LOC107771588] [db_xref=GeneID:107771588] [protein=probable protein phosphatase 2C 63] [protein_id=XP_016446483.1] [location=join(8534..8792,9415..9788,10350..10586,10905..11165)] [gbkey=CDS]
Sequence

ATGATGATGCGATCTTGTTGTCGACCATTAGAGAGGTGTTTTGGGAGAAGAAACGGAGAT
GGACTTTTATGGCATATGGATTTAAAGCCACATGCTTCTGGTGATTTCTCAATTGCTGTA
GTTCAAGCTAATTCTTCACTTGAAGACCAAAGCCAAGTCTTTACTTCTCCTTCTGCTACT
TATGTTGGTGTTTATGATGGCCATGGTGGTCCTGAAGCCTCCCGTTTTGTCAATAGACAC
CTCTTCACTTATTTGCATAAGTTTTCGAAAGAGCAAGGGGGTTTGTCGTCTGATGTGATA
AAGAGGGCATTTAATGCTACAGAAGAGGATTTTATTCAATTGGTGAAGAGATCATTGCCT
GTAATGCCACAGATTGCTTCAGTTGGATCGTGTTGTTTGGTTGGTGCAATTTCTGAGGGT
GAACTGTACGTGGCTAATTTAGGGGATTCGAGGGCAGTTCTTGGACGCAGAGGTTTTGAA
AGGGAGAAGAATTCTGTGGTTGCAGAAAGGTTGTCGACTGATCATAATGTTTCATGTGAG
AAAGTGAGGAAAGAAGTTGAATCACTTCATCCTGATGATCAGGCTGTTGTGGTTTATATT
CGAGGTGTTTGGAGAATTAAAGGCATAATTCAGGTCTCAAGATCTATCGGAGATGCCTAT
TTGAAGAAACCTGAATTTAACAGGGATCCTATATTCCAACGATATGGAAATCTTGTACCT
CTGAAGCGGCCTGTACTAACAGCTGAGCCTTCCATTGTTACAAGAAGTATCAGGCCTCAT
GACTTATTCCTCATATTTGCTTCCGACGGCCTCTGGGAACACTTAACTGATCAAGTAGTT
GTGGAAATAGTCTTTAAAAACTCAAGAGCTGGAATAGCTAAGAGATTGGTGCGAGCAGCG
ATTCAGGAGGCTGCTAAGAAGAGGGAGATGAGGTACAAGGACATACAGAAGATAGAAAAG
GGGATAAGGCGCCATTTCCACGATGATATAACAGTTATTGTGATCTATCTTGATCACCAG
AGAGAATCTTTCCACTCCAAAGGCACTCTTGGCTCTATCACCGCACCAGTAGACGTTTTC
TCATATAATTCAGAAGATGCTGAGGAGAACCAAGTGATTGGAGTTTTTTAA

Peptide Sequence

PEP ID

XP_016446483.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 63 [Nicotiana tabacum]
Sequence

MMMRSCCRPLERCFGRRNGDGLLWHMDLKPHASGDFSIAVVQANSSLEDQSQVFTSPSAT
YVGVYDGHGGPEASRFVNRHLFTYLHKFSKEQGGLSSDVIKRAFNATEEDFIQLVKRSLP
VMPQIASVGSCCLVGAISEGELYVANLGDSRAVLGRRGFEREKNSVVAERLSTDHNVSCE
KVRKEVESLHPDDQAVVVYIRGVWRIKGIIQVSRSIGDAYLKKPEFNRDPIFQRYGNLVP
LKRPVLTAEPSIVTRSIRPHDLFLIFASDGLWEHLTDQVVVEIVFKNSRAGIAKRLVRAA
IQEAAKKREMRYKDIQKIEKGIRRHFHDDITVIVIYLDHQRESFHSKGTLGSITAPVDVF
SYNSEDAEENQVIGVF

Transcript Sequence

Gene sequence data has not been registered.